Insertion junction: CLIP2.023630_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.023630
Chromosome:chromosome 4
Location:1659418
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g212700 (1 of 19) PTHR31251//PTHR31251:SF1 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGACTCAGCGCATCCAGCGACCTGCCCGCGCGCAACAAGTTCCGAGAGG
Internal bar code:AAACATATAGATCCGGTCAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2887
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:TGACCACGAAGATTGTCGCA
Suggested primer 2:TTATGGTTGGGGATGGGTGC