Insertion junction: CLIP2.023642_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.023642
Chromosome:chromosome 10
Location:6373846
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g464200 (1 of 10) IPR000104//IPR001810 - Antifreeze protein, type I // F-box domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCCCTCCCCTCCCTTTAACTAGTCATGAAGGTAACCTCCCCTCCTGT
Internal bar code:ATATGCGGACGCCAGTGGAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1368
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTGCTCCAGTTCCTCCA
Suggested primer 2:CACCAGTACGGACGTGGAAA