Insertion junction: CLIP2.023643_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.023643
Chromosome:chromosome 2
Location:5774645
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g116800 (1 of 1) PTHR12381:SF46 - SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTAGCTACGTTTACAATGTCTGCCTAAACCCACTTGACTGCAACTTGG
Internal bar code:TATGTTCAGTCTACTATATATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1178
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCTATAACCCCACGCCGTAC
Suggested primer 2:GGTTGAGGTGGTGGATGAGG