Insertion junction: CLIP2.023644_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023644
Chromosome:chromosome 3
Location:5075244
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180100 UNG2 Uracil DNA glycosylase; (1 of 1) 3.2.2.29 - Thymine-DNA glycosylase / Uracil/thymine DNA glycosylase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCTCCAGCCCTCAAACACCTCGCTCTTGAACCGCGAGCTGCACGGGA
Internal bar code:CAATATTTTGTCGGCTAGCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1779
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGGCCACTACTACTCCAA
Suggested primer 2:CACGTTCATCAGCTCCAGGT