Insertion junction: CLIP2.023666_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.023666
Chromosome:chromosome 1
Location:4017473
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g026400 EXS1 (1 of 1) PF03124 - EXS family (EXS); ERD1 homolog CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCCGGAACATGCTGTCAGACCTTAGGCCAGGCAGCTTCAGCACCCTAA
Internal bar code:ATCGATTTCCGCTTCAGTCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3088
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGAGGGGGTTGCATGAT
Suggested primer 2:TGTCCCATCACACACCGAAG