Insertion junction: CLIP2.023687_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.023687
Chromosome:chromosome 13
Location:1025485
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g568500 (1 of 1) IPR001005//IPR009057 - SANT/Myb domain // Homeodomain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGTCGCTGCCGGCCGCAACGGCTGCCCCTGCTTCACCTGCGGTGGCG
Internal bar code:TGACGTAGTGATTCTTTCGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4108
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:127
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:127

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGCCATCAACACCTGAGG
Suggested primer 2:GTACTTCTACTCGGTCGGCG