Insertion junction: CLIP2.023699_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.023699
Chromosome:chromosome 9
Location:4593809
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00171237

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATTACTGATTATACTCCAGCATAATTGGGTTAGAACAGCGGACGGGAG
Internal bar code:ATAGCATGTTGCAATAACTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1064
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTCGTTGGAAGCTGCTGA
Suggested primer 2:TACACGCCAACTGAGTCCAC