Insertion junction: CLIP2.023712_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.023712
Chromosome:chromosome 12
Location:2513003
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00076030

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGGTGACCAGAGCTGGCACGGTTCGTGTTGGTCAGGCTGCCTTAGAC
Internal bar code:TTTGCGATTGGAATGTGCCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2377
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGGTCGTTCTTGTAACCA
Suggested primer 2:CGGTCGCATTTTCTTTGGCA