Insertion junction: CLIP2.023719_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023719
Chromosome:chromosome 4
Location:2282809
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCAGCGATCGGGTACAGCGGCTGATAGTGGGGCGAGCTGGGAGCGAGC
Internal bar code:CCTATGGAGGAGAACTGGCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1036
LEAP-Seq percent confirming:94.8718
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCGTGCATGGGATGACA
Suggested primer 2:TGCGTTCGGTGGTATACTGG