Insertion junction: CLIP2.023720_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.023720
Chromosome:chromosome 9
Location:5840639
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411600 (1 of 3) IPR000104//IPR001005//IPR009057//IPR017877//IPR017930 - Antifreeze protein, type I // SANT/Myb domain // Homeodomain-like // Myb-like domain // Myb domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCGGCCGCGGTTGGTCCGACAGTTTCCATCTCCACACACACCGCCCGC
Internal bar code:AGGTGTAAATCAATACATGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3819
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AAACAATGCACACGCCTGAC
Suggested primer 2:GTCAACGGCTATACCCCTCG