Insertion junction: CLIP2.023721_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.023721
Chromosome:chromosome 6
Location:5531381
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g286750 (1 of 2) PF15247 - Histone RNA hairpin-binding protein RNA-binding domain (SLBP_RNA_bind) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGTTGCATGCAGGAACAAGCGGCGGCGGACAGACCCGGCCACGCCTGA
Internal bar code:TAATTGTCTTATTTGCCCTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4785
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGGAAGGGAGGTAGGCAG
Suggested primer 2:AAGCAGATCGACTTCGGCAA