Insertion junction: CLIP2.023724_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023724
Chromosome:chromosome 7
Location:4897765
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346500 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGATGGTGTTTGCGGCACGCCGCCGCCAGAGCTGCAATGCACAGTC
Internal bar code:GGGAGTGGTGTGGGTCAAATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1550
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGTGAATCGGATTCGCC
Suggested primer 2:GGTGTAGCCTTTCACGTGGA