Insertion junction: CLIP2.023727_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023727
Chromosome:chromosome 2
Location:3760162
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g100800 (1 of 1) PTHR22847//PTHR22847:SF410 - WD40 REPEAT PROTEIN // WD REPEAT-CONTAINING PROTEIN 27 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACGAGCCGCAGAACAGAACCGTGGGCCGGCCCGAGCCCGAGCCCGAG
Internal bar code:AGACTAGAATATAGTAGGCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2293
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATTCCTCTCCTTCCCTC
Suggested primer 2:GTCGTGCGGGTATCAATTGC