Insertion junction: CLIP2.023728_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.023728
Chromosome:chromosome 11
Location:3397226
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477100 FAP97 (1 of 1) IPR003882//IPR029488 - Pistil-specific extensin-like protein // KIAA1430 homologue; Flagellar Associated Protein 97 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCGCTCGCTCGCTTACTTGCGCGCGTTGTCGCCGTACGCCTGCGACT
Internal bar code:ATTTACACAAAAGGGATACCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:327
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAGTAGTAGTAGCCCGC
Suggested primer 2:CTGACCAATGACCACCACGA