Insertion junction: CLIP2.023737_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.023737
Chromosome:chromosome 3
Location:4158473
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173050 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCAACCAAAGCGTCGCAGGGTTTAACTTGCGGCATTTGCGCGCGCGCC
Internal bar code:TAGGTCATAGTTTGATAAACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1824
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGCACATCTACATGGAGA
Suggested primer 2:GCTCTATTCTTCCCGAGGCC