Insertion junction: CLIP2.023738_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.023738
Chromosome:chromosome 8
Location:827802
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g361100 (1 of 11) IPR000626//IPR029071 - Ubiquitin domain // Ubiquitin-related domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTCCCTGCTCACCGCCACACGCTCCCTGCTCCACACGCCCCCTGCTC
Internal bar code:AGCCTTGTAGATCTGACACGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2244
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTTCTTTTGCCTTGTGCT
Suggested primer 2:AGTTGTTGCGTGCTATGGGA