Insertion junction: CLIP2.023748_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.023748
Chromosome:chromosome 6
Location:3317531
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g277550 (1 of 3) 3.5.5.1 - Nitrilase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCCAGGTGGTCAAAGGTGGCCAAAGGTGGGTGGGACACCCTCCTGTC
Internal bar code:AAGGAGGATAGGTGTATTGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:380
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTTGCACACCTTGTTCG
Suggested primer 2:GCATGCTGTCCTATCCCTCC