Insertion junction: CLIP2.023754_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023754
Chromosome:chromosome 5
Location:319924
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g800515 (1 of 4) IPR000595//IPR003938//IPR005821//IPR018490 - Cyclic nucleotide-binding domain // Potassium channel, voltage-dependent, EAG/ELK/ERG // Ion transport domain // Cyclic nucleotide-binding-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAATGCAATATTGGGATCTAAATCACATATTGAGTGAGTTACTGCTCT
Internal bar code:GTATCTGGGGCGTCGGGGGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:542
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGGGAGTTGAGGAAGTC
Suggested primer 2:GGCACCTCCAACAAGTACGA