Insertion junction: CLIP2.023767_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.023767
Chromosome:chromosome 17
Location:1439228
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706450 LIC3 (1 of 1) IPR000104//IPR006029//IPR006201//IPR006202 - Antifreeze protein, type I // Neurotransmitter-gated ion-channel transmembrane domain // Neurotransmitter-gated ion-channel // Neurotransmitter-gated ion-channel ligand-binding domain; Ligand-gated ion channel intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAGAGCATATTCATGGTAGGTAGCCATAGAGCATGTTCAGCCGCCAG
Internal bar code:TTAGGACATCATTATCTACGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1842
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CTGATGAATGCCTGCATGCC
Suggested primer 2:CACACCACACATTGCACAGG