Insertion junction: CLIP2.023777_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.023777
Chromosome:chromosome 12
Location:3027524
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g501752 intron
lncRNA_TCONS_00075868 intron
lncRNA_TCONS_00075869 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACCGTCAGGCGGCTAGAGGCAAGGGAGCACGAGACCTGTCCATGTGTG
Internal bar code:TCACCGGATCGCGTGCCTTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3600
LEAP-Seq percent confirming:97.1831
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACTAGCCATGCACACAT
Suggested primer 2:AAGAGCACAGCACTGAGTCC