Insertion junction: CLIP2.023777_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023777
Chromosome:chromosome 12
Location:3027526
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g501752 intron
lncRNA_TCONS_00075868 intron
lncRNA_TCONS_00075869 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTTACAGGTGCTTTCGAGTCATTTCTATAGCGGAGGTTTTCGCGCCC
Internal bar code:CTAGGAGACGCAATACCCAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1893
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAGCACAGCACTGAGTCC
Suggested primer 2:AGCACTAGCCATGCACACAT