Insertion junction: CLIP2.023781_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.023781
Chromosome:chromosome 9
Location:3695425
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397290 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTCCGGCGTGCTGCTGACAGCGGCGGCAATCGCCAGGGACTGCTTGGT
Internal bar code:TTTTTGTACCAATCATGAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2697
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTTTGCCTGGTTGCTGGA
Suggested primer 2:GCACTGCGCATAATCCAAGG