Insertion junction: CLIP2.023783_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.023783
Chromosome:chromosome 17
Location:1189633
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g704550 HRF1 (1 of 1) PTHR14083:SF0 - PROTEIN YIF-1, ISOFORM B; HRF1 homolog intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAGGAGAATGGAACTTGACCTGGCCAAGATTACTGCCCCTCAGCTTTC
Internal bar code:ATGACTGAATCAGTCACTGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2318
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCTAGGACAGGTCGCCATAC
Suggested primer 2:TAGAGCACCAGGGAGAGACC