Insertion junction: CLIP2.023793_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.023793
Chromosome:chromosome 12
Location:9561771
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g539900 (1 of 1) K00166 - 2-oxoisovalerate dehydrogenase E1 component alpha subunit (BCKDHA, bkdA1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATCCTCTCCCTCCGACCCGTCCCTCCCTCCTCTCATCTCCTCCTCCCA
Internal bar code:GTAACTTTGAGGGCAATTAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:571
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTGTTCCAAACTGGCAC
Suggested primer 2:GAGGTGATCACTCCCTCCCT