Insertion junction: CLIP2.023806_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023806
Chromosome:chromosome 16
Location:6686335
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673250 NRR1 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED; Nitrogen Response Regulator 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAAGCGGCCGCCGCCGCCGGCGGCCGCCGCCGCCTGCACCGCCGCCTC
Internal bar code:GGCGGTAGGACCTAAAAGAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2723
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGGATCCATGCCCGTGTTTG
Suggested primer 2:GCATATCTACGCACGGACCA