Insertion junction: CLIP2.023806_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.023806
Chromosome:chromosome 16
Location:6686337
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673250 NRR1 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED; Nitrogen Response Regulator 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGTGACCTAATGAAGAAGTTCAAGAGCATGTTCAAGAGGAGCCCGGGC
Internal bar code:GGTTAGTCAGGCATCTCTCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2488
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:114
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:114

Suggested primers for confirmation by PCR

Suggested primer 1:GCATATCTACGCACGGACCA
Suggested primer 2:TGGATCCATGCCCGTGTTTG