Insertion junction: CLIP2.023811_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023811
Chromosome:chromosome 11
Location:2142181
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467742 (1 of 3) PF04434 - SWIM zinc finger (SWIM) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCACCACAGGCATACCATAAGTGCATGCCTACTGCGTGTGGCGTCATT
Internal bar code:ATATAGTCAAAGCGTGTCTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3909
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTTTGCAGCAGGGTAACG
Suggested primer 2:TTATCGAGGCGCACCCATAC