Insertion junction: CLIP2.023812_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.023812
Chromosome:chromosome 17
Location:2136190
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g711950 PFP1 Prefoldin-family protein; (1 of 1) PTHR13345//PTHR13345:SF4 - NUT2 AND UXT // PROTEIN UXT intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATGCCCCGCTACCCGCATGCGTACCTCGCCTCTCTTGCACCGCACCCA
Internal bar code:CGTTACACTGATGTACGGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2082
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGCCTTGGTTCCAATTT
Suggested primer 2:ATTCCTTGCACCAGCGGTAA