Insertion junction: CLIP2.023812_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.023812
Chromosome:chromosome 17
Location:2136192
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g711950 PFP1 Prefoldin-family protein; (1 of 1) PTHR13345//PTHR13345:SF4 - NUT2 AND UXT // PROTEIN UXT intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCTGGCTCGCCGCCGACCAGGTTGCAACGGGTGTTGCCCGCACCCAGG
Internal bar code:GGGATCGGGGATATCTGTGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2156
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCCTTGCACCAGCGGTAA
Suggested primer 2:GCGTGCCTTGGTTCCAATTT