Insertion junction: CLIP2.023815_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.023815
Chromosome:chromosome 7
Location:5687815
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g352800 (1 of 1) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCGTCTGGTTCTATTCCTTGCAAGGCTGTGCGCCACAACCTGTCCTCT
Internal bar code:GTCTTTACGCCTCGTGTGATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:603
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCACGTCGGAGTCAACAT
Suggested primer 2:GTATTCACGCCTCTAGCCCC