Insertion junction: CLIP2.023831_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023831
Chromosome:chromosome 1
Location:4137650
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g027550 (1 of 3) PTHR24291//PTHR24291:SF54 - FAMILY NOT NAMED // PROTEIN LUTEIN DEFICIENT 5, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTCTCCAGGTCTGCCGGGATGAGGCCCTTGCCCATGATGGGCTCAAGG
Internal bar code:GCGCAATGAGGCGTGACTAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:284
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TACTTAAGGTGGGGGAGGGG
Suggested primer 2:ACCCCCGCCCTATTTCTTTG