Insertion junction: CLIP2.023834_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.023834
Chromosome:chromosome 1
Location:7446781
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g052550 (1 of 110) 3.4.19.12 - Ubiquitinyl hydrolase 1 / Ubiquitin thiolesterase 3'UTR
Cre01.g800135 (1 of 1) PTHR30217//PTHR30217:SF10 - UNCHARACTERIZED PROTEASE // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCCATAATCGCCCCAGCTCACGTGCAAACCTGTCCTAATTACTGCATG
Internal bar code:TTGTTTTTGTGGACGAAGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:353
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGTGGGGGTGTATTTGG
Suggested primer 2:TCGGCATGTATCGTCTCAGC