Insertion junction: CLIP2.023844_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023844
Chromosome:chromosome 1
Location:2015455
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g011100 CAS1 (1 of 1) 5.4.99.8 - Cycloartenol synthase / 2,3-epoxysqualene--cycloartenol cyclase; Terpenoid cylase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCCCTGACCCGCCCTGCTGCTGTCGTGCTGCAAACACTGCTCTCAGCC
Internal bar code:TCTTTAAAGGGCGAGTAGCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2177
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCAGCGTTGACAGAATGA
Suggested primer 2:GGGGTGAGGAATATGAGGCG