Insertion junction: CLIP2.023849_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023849
Chromosome:chromosome 17
Location:4001976
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728300 FAP226,CAL6 Flagellar Associated Protein 226; (1 of 3) 3.4.22.54 - Calpain-3 / Muscle-specific calcium-activated neutral protease 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGCCGGGCCACAGCGGCTATGCACAGCCCGACCCGTTCTTTCTAGTA
Internal bar code:CCGCTTGCCCACATTAGATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2284
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGCAAATTTGGGTGCAGG
Suggested primer 2:ATCATCTTGATAGCGCGCCA