Insertion junction: CLIP2.023855_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023855
Chromosome:chromosome 12
Location:8460229
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549850 (1 of 1) PF09445 - RNA cap guanine-N2 methyltransferase (Methyltransf_15) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGAGTAGGAACGCATGACCGCGTTCCCTCCGCACCGCACAGCCCTCTTG
Internal bar code:GCTGGGAAGGTGTATGTCGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3349
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CGACATATCGGAGTGGGTGG
Suggested primer 2:GCTGTAGCACCTTCTCCTCC