Insertion junction: CLIP2.023860_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023860
Chromosome:chromosome 9
Location:5607188
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409801 (1 of 2) PTHR11373:SF4 - DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGCCCTCAACGCGCATGGTCCTGCGTGTGCCTCATTCCTTATCCTCC
Internal bar code:CAAAGAGCAGCCGTGGCGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:144
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CACATTGGCCTGGTTGCAAA
Suggested primer 2:CCACCCAGGAAGACCAAGTC