Insertion junction: CLIP2.023862_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.023862
Chromosome:chromosome 1
Location:6136105
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043600 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGTTGGTTTAGAGTACAGGCACGTGCACGTTATGTCGGTAGTGTATG
Internal bar code:GATATATTTGGCGGTATGCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2284
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACAACCCCATTGCTTTG
Suggested primer 2:ACATACACAGCCTCAAGCCC