Insertion junction: CLIP2.023862_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023862
Chromosome:chromosome 3
Location:6890785
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g198000 PPP15 (1 of 2) PF00481//PF13672 - Protein phosphatase 2C (PP2C) // Protein phosphatase 2C (PP2C_2); Phosphoprotein phosphatase 2C-related outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTCAACTCTATGTGATGTATGGACAGCGTGCATCGGCAGCCTTGTTCA
Internal bar code:TATCGACCTAATGCATATTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4327
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:AAGATACGGGCACTGGAACG
Suggested primer 2:TCAAGAGGCTTCGGTCACAC