Insertion junction: CLIP2.023863_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023863
Chromosome:chromosome 11
Location:2100222
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467751 (1 of 4) K06067 - histone deacetylase 1/2 (HDAC1_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACAATCGCACTCCCGCGTCGCAGCCCCGCACCTGCAGGCCGACGTATT
Internal bar code:GGAGGTTGTGGAAGACTACGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:855
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGACGACGAGGAGGAAGATG
Suggested primer 2:TCAAGCCACTCGTCACTCAC