Insertion junction: CLIP2.023868_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023868
Chromosome:chromosome 3
Location:1589940
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g152450 (1 of 1) PTHR23308:SF2 - KANADAPTIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACAGGCTCATCCCGCCCAGTCCGGCACCCAGGTCGCGAGCCCCCTCC
Internal bar code:GATACAGAAAAAAGACGGAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:124
LEAP-Seq percent confirming:13.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGGCGACAGTACCTTGAC
Suggested primer 2:ACCGTCATGTGCATGGTCAT