Insertion junction: CLIP2.023873_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.023873
Chromosome:chromosome 3
Location:6027510
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189850 (1 of 1) IPR000253//IPR001357//IPR008984 - Forkhead-associated (FHA) domain // BRCT domain // SMAD/FHA domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGGGCGTACGGCCGCTTTGGCCGGTGGGCGGCCCACGGTCACCTCGCG
Internal bar code:TATAGGTCCTTAGTGTTTTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2509
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGGTCACCTGTTTAACGA
Suggested primer 2:GTTGGTCGGTTGCACTTCAC