Insertion junction: CLIP2.023876_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.023876
Chromosome:chromosome 17
Location:528056
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699400 (1 of 6) PTHR10994//PTHR10994:SF72 - RETICULON // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCTCGACTGCCAGCCAGCACGTGACCTCGCCGGCAGGCCGCGTGGGCG
Internal bar code:ATGGATCAGTCGCTTATGCCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:574
LEAP-Seq percent confirming:41.1765
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTGTCCCGTTGAGCACAG
Suggested primer 2:TTCCTCACCCTTACGCCAAC