Insertion junction: CLIP2.023877_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.023877
Chromosome:chromosome 6
Location:6136982
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g291500 RWP6 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCGCACCACACCACGGGTTGGGTCCACAATGGCTGATGTTGCCGTGC
Internal bar code:CACAGGGGATTTACATAATACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1619
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAACGCACTAGAGCCGAA
Suggested primer 2:AGTCAACGTCCGTGTGACTC