Insertion junction: CLIP2.023894_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023894
Chromosome:chromosome 3
Location:2684772
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160900 (1 of 1) PF07714//PF12796//PF13857 - Protein tyrosine kinase (Pkinase_Tyr) // Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAGGGGGTTAGCCACTCATGCGAACGGTTTGTATCAAAGGAGGGGAAG
Internal bar code:TCTGGCCGTCAATTAACTCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1246
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CACGATGACCAGCCTCCATT
Suggested primer 2:GCTGCAACTGTACCTGCCTA