Insertion junction: CLIP2.023894_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.023894
Chromosome:chromosome 3
Location:2684780
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160900 (1 of 1) PF07714//PF12796//PF13857 - Protein tyrosine kinase (Pkinase_Tyr) // Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCACTTCTTGTACAATCGTGAATGTAACCCACCCCTTCACTCCCCACCG
Internal bar code:AATTTTTGACTTGACGTTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1006
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCAACTGTACCTGCCTA
Suggested primer 2:CACGATGACCAGCCTCCATT