Insertion junction: CLIP2.023897_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.023897
Chromosome:chromosome 3
Location:7634873
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g204400 (1 of 1) K09651 - rhomboid domain-containing protein 1 [EC:3.4.21.-] (RHBDD1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGCTGGGCGGAGCTGGTGCTGGCCTCCTACCTCACGCCTCAGGCCTG
Internal bar code:GGTACAAGTGTTTTGTGATGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3322
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCACATACACGCACATCACC
Suggested primer 2:GCCCTCAAGGTACGGTGTAC