Insertion junction: CLIP2.023900_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023900
Chromosome:chromosome 1
Location:6132411
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043550 (1 of 3) IPR000104//IPR004333 - Antifreeze protein, type I // Transcription factor, SBP-box intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCTGACCGATCCTGACCGACGCTGACCATCGGTTTATTCGGGTGACCG
Internal bar code:GGGCTGCCAGTACCCGATCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1208
LEAP-Seq percent confirming:89.6552
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ATTAGTTGACCTGCCGCCTC
Suggested primer 2:TGCGGCGGCATATACATGAT