Insertion junction: CLIP2.023904_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.023904
Chromosome:chromosome 4
Location:3129201
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225850 VAMP73,VAM3,VAMP3 Endosomal R-SNARE protein, Vamp7/Nyv1-family (R.III); (1 of 3) PTHR21136//PTHR21136:SF4 - SNARE PROTEINS // N-SYNAPTOBREVIN, ISOFORM J intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGTGTTTACCCTTCCAGTCCAGTCCCTGCGCCCGCGCCTTCCGCTTCT
Internal bar code:GTGAAAGATGTCTGATCTGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3573
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TTAGCGGCATAGTCGAGCAG
Suggested primer 2:TCACCTTCTTCTGCACGGAC