Insertion junction: CLIP2.023904_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023904
Chromosome:chromosome 4
Location:3129202
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225850 VAMP73,VAM3,VAMP3 Endosomal R-SNARE protein, Vamp7/Nyv1-family (R.III); (1 of 3) PTHR21136//PTHR21136:SF4 - SNARE PROTEINS // N-SYNAPTOBREVIN, ISOFORM J intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGAGCCGACCCACTCACCCACAGCCCCGGGTCGTGTGGATGCGCGGTA
Internal bar code:AGCCGCGTGGGATTCATCTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3030
LEAP-Seq percent confirming:97.8723
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCTTCTTCTGCACGGAC
Suggested primer 2:TTAGCGGCATAGTCGAGCAG