Insertion junction: CLIP2.023905_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.023905
Chromosome:chromosome 3
Location:6479170
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193600 (1 of 4) 2.7.11.13 - Protein kinase C / PKC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAACGGCGCGAACGCGTCCGTGATCATCGTCGGCGGTTCCTGAGTGAAC
Internal bar code:TCCAGCTAGGTTATAGGGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:615
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGACCGCAGAGACTAGC
Suggested primer 2:ACGTCCGTATACGCATTCCC